Taxon	F18249.S01	F18249.S02	F18249.S03	F18249.S04	F18249.S05	F18249.S06	F18249.S07	F18249.S08	F18249.S09	F18249.S10	F18249.S11	F18249.S12	F18249.S13	F18249.S14	F18249.S15	F18249.S16
Bifidobacterium pseudolongum (SP105) 	146	161	864	1397	1297	657	163	160	50	132	49	78	54	28	171	96
Streptococcus agalactiae (SP110) 	76	19	102	122	2261	651	224	75	974	179	191	956	308	192	593	1337
Lactobacillus intestinalis (SP119) 	33	173	93	193	167	45	458	121	20	97	57	29	96	122	390	20
Clostridium disporicum (SP123) 	0	0	6	0	11	10	0	0	0	0	0	0	6	5	0	0
Shigella dysenteriae (SP136) 	0	0	0	0	0	0	0	0	22	153	14	1039	170	57	2319	91
Actinidia eriantha (SP14) 	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	15
Salmonella enterica (SP144) 	0	18	0	75	106	22	16	0	0	380	120	348	61	105	3736	1996
Mammaliicoccus sciuri (SP155) 	125	388	0	0	3	0	0	66	2	0	1122	3973	59	0	0	32
Phocaeicola vulgatus (SP162) 	0	0	0	0	10	8	13	0	208	270	0	25	11	2	1208	0
Bacteroides uniformis (SP167) 	0	0	0	6	4	4	0	0	44	57	0	0	0	0	29	0
Parasutterella excrementihominis (SP17) 	0	7	0	3	0	0	0	0	0	21	0	0	0	0	12	0
Longicatena caecimuris (SP176) 	0	0	0	0	0	0	3	0	30	12	0	0	0	0	9	0
Collinsella aerofaciens (SP189) 	21	55	22	64	0	0	225	17	0	0	0	0	0	0	0	6
Shigella flexneri (SP191) 	0	0	0	0	0	0	0	0	23	92	0	400	84	43	1001	34
Roseburia hominis (SP196) 	0	0	0	0	7	0	0	0	0	0	0	0	0	0	21	0
Akkermansia muciniphila (SP199) 	0	3	33	59	105	28	37	10	0	81	0	0	0	0	22	0
Bacteroides intestinalis (SP202) 	0	0	0	0	19	0	0	0	0	80	0	0	0	0	75	0
Enterococcus faecalis (SP207) 	4	9	14	90	46	10	0	0	851	782	51	869	62	803	4228	8
Monoglobus pectinilyticus (SP217) 	0	0	0	6	0	0	3	0	0	0	0	0	0	0	0	0
Corynebacterium amycolatum (SP226) 	17	128	6	58	187	19	69	16	45	67	120	94	0	30	229	259
Parabacteroides goldsteinii (SP227) 	0	0	0	0	0	3	0	0	0	0	0	0	0	0	36	0
Erysipelatoclostridium [Clostridium] saccharogumia (SP240) 	0	0	0	0	0	0	0	0	11	0	0	0	0	0	15	0
Cutibacterium acnes (SP249) 	0	0	0	0	0	0	0	0	0	7	0	3	0	0	0	5
Bacteroides xylanisolvens (SP26) 	0	0	0	0	0	0	2	0	0	16	0	0	0	0	63	0
Enterococcus gallinarum (SP27) 	0	0	0	0	0	0	0	0	6	0	0	0	130	51	1833	272
Streptococcus mutans (SP28) 	29638	37587	30523	51511	40962	27046	40008	21272	2396	1034	1696	9095	829	251	0	0
Lachnospiraceae_[G-3] bacterium_MOT-168 (SP3) 	0	0	0	0	0	0	0	0	0	46	0	0	0	0	24	0
Haemophilus parainfluenzae (SP30) 	1088	3065	560	1562	4060	6215	1679	1404	1506	275	717	705	504	179	2380	1566
Escherichia coli (SP35) 	0	0	0	0	0	0	0	30	0	137	23	1440	260	80	2989	116
Romboutsia ilealis (SP37) 	0	0	18	4	228	50	23	4	29	156	8	32	17	81	353	13
Citrobacter koseri (SP43) 	0	20	21	77	126	56	0	7	38	1187	191	1031	113	152	10555	5336
Bacteroides thetaiotaomicron (SP44) 	0	0	0	0	3	0	0	0	22	35	0	0	0	0	31	0
Veillonella parvula (SP51) 	376	289	210	628	727	678	378	244	102	30	53	330	16	7	48	76
Blautia glucerasea (SP52) 	0	12	0	0	0	0	23	0	0	0	0	0	0	0	0	0
Staphylococcus haemolyticus (SP54) 	0	0	115	0	11	0	160	3	0	0	0	0	0	0	0	0
Lactiplantibacillus plantarum (SP57) 	0	0	92	554	0	0	120	0	0	0	0	0	0	0	0	0
Staphylococcus ureilyticus (SP60) 	0	37	26	47	51	0	0	33	1651	1393	206	2929	735	668	3085	4467
Adlercreutzia equolifaciens (SP7) 	0	0	0	0	19	3	0	0	0	0	0	0	0	0	0	0
Ligilactobacillus murinus (SP72) 	2109	1392	1208	1606	429	122	2134	424	7889	10673	222	79	1431	407	5610	406
Streptococcus sp._HMT_064 (SP76) 	6	39	0	12	259	41	376	151	23	29	31	0	8	0	934	308
Granulicatella adiacens (SP82) 	26	153	48	95	56	33	138	161	214	5	0	0	0	0	0	234
Shigella sonnei (SP83) 	0	0	0	0	0	17	0	19	14	65	30	551	152	89	1115	78
Alistipes finegoldii (SP96) 	0	0	0	0	8	0	0	0	0	10	0	0	0	0	0	0
Enterococcus avium (SP98) 	1	0	0	2	0	80	24	8	88	66	72	73	144	38	868	640
Eubacterium coprostanoligenes_nov_91.379% (SPN1016) 	0	0	0	0	0	0	0	0	69	0	0	0	0	0	173	0
Blautia schinkii_nov_94.340% (SPN1050) 	0	0	0	0	0	0	0	0	0	55	0	0	0	0	20	0
Lachnospiraceae_[G-14] bacterium_MOT-183_nov_92.060% (SPN1059) 	0	0	0	0	0	0	0	0	0	32	0	0	0	0	5	0
Faecalicatena fissicatena_nov_93.946% (SPN107) 	0	0	0	0	0	0	0	0	0	34	0	0	0	0	99	0
Mediterraneibacter [Ruminococcus] torques_nov_93.515% (SPN1114) 	0	0	0	0	0	0	0	0	19	0	0	0	0	0	79	0
Duncaniella freteri_nov_89.024% (SPN13) 	0	0	0	7	27	0	10	0	51	216	0	0	5	0	199	0
Gluceribacter canis_nov_94.561% (SPN14) 	0	0	0	0	0	0	0	0	36	20	0	0	0	0	0	0
Erysipelatoclostridium [Clostridium] saccharogumia_nov_96.042% (SPN24) 	0	0	0	0	0	0	0	0	11	13	0	0	0	0	0	0
Agathobaculum desmolans_nov_86.345% (SPN243) 	0	0	0	0	0	0	0	0	0	25	0	0	0	0	28	0
Anaerocolumna cellulosilytica_nov_88.655% (SPN256) 	0	0	0	0	0	0	0	0	0	6	0	0	0	0	87	0
Turicibacter sanguinis_nov_96.137% (SPN269) 	0	0	0	0	0	0	0	0	0	26	0	0	15	15	0	0
Oscillospiraceae_[G-4] bacterium_MOT-151_nov_93.347% (SPN277) 	0	0	0	0	0	0	0	0	0	4	0	0	0	0	11	0
Eubacterium coprostanoligenes_nov_91.379% (SPN284) 	0	0	0	0	0	0	0	0	27	76	0	0	0	0	0	11
Eubacterium coprostanoligenes_nov_90.129% (SPN340) 	0	0	0	0	33	3	0	0	0	0	0	0	0	0	0	0
Rothia nasimurium_nov_97.228% (SPN341) 	11177	42436	12936	29560	37560	48509	19783	30468	35436	49992	33253	35753	55514	31810	91026	59006
Blautia faecicola_nov_93.111% (SPN415) 	0	0	0	0	0	0	0	0	45	146	0	0	0	0	101	0
Raoultibacter timonensis_nov_90.476% (SPN425) 	0	0	0	0	0	0	0	0	42	5	0	0	0	0	23	0
Butyricicoccus pullicaecorum_nov_87.216% (SPN440) 	0	0	0	0	7	0	0	0	0	0	6	6	0	0	0	0
Gluceribacter canis_nov_93.946% (SPN447) 	0	0	0	0	0	0	0	0	0	0	0	0	7	0	44	0
Eubacteriales_[G-1] bacterium_MOT-158_nov_91.507% (SPN449) 	0	3	0	0	9	0	0	0	0	6	0	0	0	0	18	0
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_93.555% (SPN51) 	0	0	0	0	0	0	0	0	0	10	0	0	0	0	17	0
Blautia producta_nov_89.834% (SPN520) 	0	0	0	0	0	0	0	0	0	25	0	0	0	0	84	0
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_87.885% (SPN54) 	0	0	0	0	0	0	0	0	0	14	0	0	0	0	25	0
Barnesiella viscericola_nov_90.447% (SPN6) 	0	0	0	0	0	0	0	0	0	4	0	0	0	0	20	0
Lachnospiraceae_[G-3] bacterium_MOT-168_nov_93.946% (SPN609) 	0	0	0	0	0	0	0	0	7	14	0	0	0	0	6	0
Lachnospiraceae_[G-12] bacterium_MOT-180_nov_90.184% (SPN682) 	0	0	0	0	0	0	0	0	0	12	0	0	0	0	10	0
Eubacteriales_[G-1] bacterium_MOT-161_nov_92.308% (SPN685) 	0	0	0	0	0	0	0	0	10	15	0	0	0	0	51	0
Ruminococcus champanellensis_nov_91.810% (SPN712) 	0	0	0	0	0	0	0	0	121	353	0	0	6	4	534	0
Fusicatenibacter saccharivorans_nov_89.263% (SPN733) 	0	0	0	0	0	0	0	0	0	64	0	0	0	0	7	0
Ruminococcus albus_nov_91.045% (SPN74) 	0	0	6	0	65	6	0	0	0	0	0	0	0	0	0	0
Streptococcus sp._MOT-045_nov_97.764% (SPN780) 	5372	23322	5105	14836	16621	26814	12226	15658	21103	26749	23947	26538	35359	15306	28355	23572
Oscillospiraceae_[G-6] bacterium_MOT-153_nov_97.831% (SPN789) 	0	0	0	0	0	0	0	0	0	74	0	0	0	0	658	0
Blautia luti_nov_96.429% (SPN807) 	0	0	0	0	0	0	25	11	0	0	0	0	0	0	0	0
Pseudoflavonifractor phocaeensis_nov_91.097% (SPN816) 	0	0	0	0	0	0	0	0	0	6	0	0	0	0	25	0
Eubacteriales_[G-1] bacterium_MOT-159_nov_92.797% (SPN824) 	0	0	0	0	0	0	0	0	0	31	0	0	0	0	35	0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.228% (SPN827) 	0	0	0	0	42	0	0	0	7	0	0	0	0	0	0	0
Anaerotignum aminivorans_nov_92.812% (SPN831) 	0	0	0	0	0	0	0	0	0	5	0	0	0	0	24	0
Paludicola psychrotolerans_nov_87.037% (SPN842) 	0	0	0	0	0	0	0	0	0	6	0	0	0	0	13	0
Oscillospiraceae_[G-4] bacterium_MOT-151_nov_95.417% (SPN843) 	0	0	0	0	0	0	0	0	11	0	0	0	0	0	27	0
Drancourtella massiliensis_nov_92.276% (SPN848) 	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	8
Lachnospiraceae_[G-6] bacterium_MOT-171_nov_94.549% (SPN850) 	0	0	0	0	0	0	0	0	0	26	0	0	0	0	39	0
Lachnospiraceae_[G-4] bacterium_MOT-169_nov_97.484% (SPN861) 	0	0	0	0	0	0	13	0	0	0	0	3	0	0	0	0
Chryseobacterium culicis_nov_97.280% (SPN879) 	0	0	15	121	72	13	5	41	0	0	0	0	0	0	0	0
Blautia producta_nov_96.226% (SPN880) 	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	22
Lacrimispora saccharolytica_nov_90.625% (SPN886) 	0	0	0	0	0	0	0	0	11	213	0	0	0	0	30	0
Oscillospiraceae_[G-1] bacterium_MOT-147_nov_90.760% (SPN926) 	0	0	0	0	0	0	0	0	50	167	0	0	0	0	0	0
Eubacterium xylanophilum_nov_91.313% (SPN948) 	0	0	0	0	0	0	0	0	22	201	0	0	0	0	225	0
Streptococcus parasanguinis_parasanguinis_clade_721 (SPP10) 	362	417	886	1450	825	723	941	666	431	30	347	70	54	11	23	2194
Lactiplantibacillus_Lactobacillus pentosus_plantarum (SPP15) 	0	0	0	469	0	0	85	0	0	0	0	0	0	0	0	0
Staphylococcus saprophyticus_xylosus (SPP19) 	82	259	23	24	29	0	333	441	0	0	9	51	0	6	0	0
Staphylococcus argenteus_aureus_roterodami (SPP2) 	64	276	135	82	2848	685	271	377	592	30	0	0	9	31	415	59
Veillonella dispar_parvula (SPP21) 	1031	643	554	1966	1846	1606	961	603	276	70	129	833	85	37	122	162
